Co-expression analysis

Gene ID	Gma.5686.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g47080: CKB1 (HF=3e-58)
Module size	11 genes
NF	0.41
%ile	70.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	80.7	0.98	Gma.5686.1.S1_at	CA935460	-	-	3e-58	At5g47080	CKB1	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	Gma.7528.1.S1_s_at	CD415645	-	-	5e-10	At3g06720	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.4391.1.S1_at	BG654256	-	-	1e-73	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	Gma.1266.1.S1_a_at	BU548161	-	-	2e-2	At4g12650	-	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.12800.2.S1_at	BE057137	-	-	8e+0	At5g51030	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	Gma.1837.1.S1_at	AW309339	-	-	7e-9	At1g71900	-	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	Gma.13364.1.A1_s_at	BI969885	-	-	1e+1	At5g23903	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.52088.1.S1_at	CA850707	-	-	1e+1	At5g57510	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.99	Gma.10823.2.S1_at	BM307619	-	-	2e-82	At5g36230	eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	Gma.10825.1.S1_at	CD407330	-	-	1e-3	At3g01435	Expressed protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	Gma.5135.1.S1_at	CD406583	-	-	5e-44	At5g23575	transmembrane protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	96.6	GSM201130	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
3.3	96.2	GSM191092	Soybean_Cotyledon_SEED2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.0	95.6	GSM184828	Whole Seed at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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