Co-expression analysis

Gene ID Gma.5629.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g39580: peroxidase, putative (HF=3e-9)
Module size 6 genes
NF 0.00
%ile 2.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8091.50.89Gma.5629.1.S1_atBQ740550--3e-9At5g39580peroxidase, putativeO.I.H.G.S.X.
0.5576.30.90Gma.5629.2.S1_a_atBG042866--6e-2At5g39580peroxidase, putativeO.I.H.G.S.X.
0.0710.20.91GmaAffx.92979.1.S1_s_atCF808704--1e-12At2g38310unknown proteinO.I.H.G.S.X.
-1.40.92GmaAffx.19116.1.S1_atBI968419receptor-like protein kinase 2-like-2e-29At1g53420serine/threonine protein kinase-relatedO.I.H.G.S.X.
-1.40.88GmaAffx.64151.1.S1_atBM887517--2e-32At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)O.I.H.G.S.X.
-1.40.91Gma.2313.2.S1_s_atBI700522hypothetical LOC547601-2e-35At4g27450unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os07g0677600, orthologous to the query gene, Gma.5629.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6181.2Os07g0677600At5g39580-Cationic peroxidase1e-2At5g39580peroxidase, putativeO.I.H.G.S.X.
0.8395.8Os07g0600200At5g39580-Conserved hypothetical protein5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.8295.0Os07g0599900At5g39580-Conserved hypothetical protein1e-1At5g09530hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.8094.6Os08g0335600At5g39580-Protein of unknown function DUF568 domaincontaining protein1e-1At2g39520unknown proteinO.I.H.G.S.X.
0.6987.9Os07g0142600At5g39580-Conserved hypothetical protein1e+0At2g07363unknown proteinO.I.H.G.S.X.
0.6787.2Os08g0478000At5g39580-Conserved hypothetical protein4e-1At2g4051040S ribosomal protein S26 (RPS26A)O.I.H.G.S.X.
0.6181.2Os07g0668300At5g39580-Lipolytic enzyme, G-D-S-L family protein1e-2At2g23540GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.6079.7Os07g0142300At5g39580-Conserved hypothetical protein7e+0At4g30730unknown proteinO.I.H.G.S.X.
0.5978.0Os05g0245300At5g39580-Protein of unknown function DUF588 family protein7e+0Atcg00790-O.I.H.G.S.X.
0.5978.0Os01g0827300At5g39580-Laccase precursor (EC 1.10.3.2)7e-5At2g30210LAC3 (laccase 3)O.I.H.G.S.X.
0.5676.3Os06g0274800At5g39580-Peroxidase 11 precursor (EC 1.11.1.7) (AtperoxP11) (ATP23a/ATP23b)5e-4At1g68850peroxidase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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