Co-expression analysis

Gene ID Gma.5629.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g39580: peroxidase, putative (HF=3e-9)
Module size 6 genes
NF 0.00
%ile 2.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8091.50.89Gma.5629.1.S1_atBQ740550--3e-9At5g39580peroxidase, putativeO.I.H.G.S.X.
0.5576.30.90Gma.5629.2.S1_a_atBG042866--6e-2At5g39580peroxidase, putativeO.I.H.G.S.X.
0.0710.20.91GmaAffx.92979.1.S1_s_atCF808704--1e-12At2g38310unknown proteinO.I.H.G.S.X.
-1.40.92GmaAffx.19116.1.S1_atBI968419receptor-like protein kinase 2-like-2e-29At1g53420serine/threonine protein kinase-relatedO.I.H.G.S.X.
-1.40.88GmaAffx.64151.1.S1_atBM887517--2e-32At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)O.I.H.G.S.X.
-1.40.91Gma.2313.2.S1_s_atBI700522hypothetical LOC547601-2e-35At4g27450unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig2113_at, orthologous to the query gene, Gma.5629.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8092.5Contig2113_atAt5g39580--4e-2At1g44970peroxidase, putativeO.I.H.G.S.X.
0.6784.7Contig15076_atAt5g39580--5e+0At2g32360ubiquitin family proteinO.I.H.G.S.X.
0.6480.9Contig20893_atAt5g39580--4e-2At1g44542cyclase family proteinO.I.H.G.S.X.
0.4661.0Contig97_s_atAt5g39580translationally-controlled tumor protein homolog-2e-8At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.
0.4458.9Contig2580_5_s_atAt5g39580--O.I.H.G.S.X.
0.3545.1Contig6632_s_atAt5g39580--2e-3At5g37200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3342.6HVSMEc0009P17f_s_atAt5g39580--1e-2At3g10280KCS14 (3-KETOACYL-COA SYNTHASE 14)O.I.H.G.S.X.
0.3138.6EBro02_SQ006_O21_s_atAt5g39580--1e-2At4g10810unknown proteinO.I.H.G.S.X.
0.2935.5Contig18444_atAt5g39580--2e+0At1g08650PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)O.I.H.G.S.X.
0.2732.1Contig20846_atAt5g39580--3e-6At4g36860zinc ion bindingO.I.H.G.S.X.
0.1919.6Mla12DH_orf_3pri12_atAt5g39580--6e-1At4g2362050S ribosomal protein-relatedO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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