Co-expression analysis

Gene ID	Gma.560.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g26690: nitrate transporter (NTP2) (HF=1e-14)
Module size	7 genes
NF	0.17
%ile	39.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.32	43.7	0.77	Gma.560.1.S1_at	AW310905	-	-	1e-14	At2g26690	nitrate transporter (NTP2)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.89	GmaAffx.86049.1.S1_at	BF598238	-	-	7e-12	At3g48720	transferase family protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.74	Gma.3172.1.S1_s_at	BU550006	-	-	3e-3	At5g64120	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.84	Gma.11719.1.A1_at	AW310532	-	-	2e+0	At1g17620	-	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.82	GmaAffx.10908.2.S1_at	CA802289	-	-	2e-2	At1g18835	MIF3 (MINI ZINC FINGER)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.80	GmaAffx.67541.1.A1_at	BE822136	-	-	2e-1	At5g26692	-	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.79	Gma.7424.1.S1_at	AW184812	-	-	6e-1	At2g39060	nodulin MtN3 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	98.4	GSM292175	30-C012.1A.SLA2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM294218	69_3140.2H.R9H3P_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM292197	59_C014.1A.SLA3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM293998	51_3092.2F.SLF1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM294567	38_3214.2L.SLL3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294237	86_3142.2H.SLH3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM294571	41_3212.2L.R9L3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM293016	21_1058.1N.R033P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293320	10_C082.1Q.SLQ2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293882	33_3082.2E.SLE2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293419	10_C108.1R.R9R3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM294219	6_2368.2H.R229P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292173	29-C006.1A.SLA1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM294206	58_2338.2H.R240P_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM294197	4_3138.2H.R9H2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292158	10_C010.1A.R9A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM294244	92_2340.2H.R202P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM294236	85_3128.2H.SLH1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM292393	69_C106.1F.SLF3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293331	20_C078.1Q.SLQ1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292224	18_C022.1B.SLB1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293459	47_1596.1R.R009P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293431	21_C094.1R.SLR1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292444	45_C114.1G.SLG1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292168	23_1022.1A.R012P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294175	38_3132.2H.R9H1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293000	75_C234.1M.SLM3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294051	9_2252.2F.R079P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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