Co-expression analysis

Gene ID Gma.5574.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g15520: PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) (HF=2e-21)
Module size 6 genes
NF 0.52
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97Gma.5574.2.S1_atBI893662--2e-21At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)O.I.H.G.S.X.
0.7388.90.94GmaAffx.4896.1.A1_atBI968136--6e+0At4g11510RALFL28 (ralf-like 28)O.I.H.G.S.X.
0.6786.10.97GmaAffx.40841.1.S1_atBG509363--1e-24At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)O.I.H.G.S.X.
0.4463.30.97Gma.5574.1.S1_s_atBI426378--2e-3At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)O.I.H.G.S.X.
0.3040.40.97Gma.4927.2.S1_atBM521060--2e-9At4g15236ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.2633.90.97GmaAffx.93103.1.S1_s_atCF808828--5e-3At4g15236ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM29380245_3067.2D.R9D3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM2449093_VP9.I3L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.195.8GSM29340890_C079.1Q.R9Q2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29279353_C197.1K.R9K3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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