Co-expression analysis

Gene ID Gma.5574.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g15520: PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) (HF=2e-3)
Module size 9 genes
NF 0.64
%ile 92.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5778.80.97Gma.5574.1.S1_s_atBI426378--2e-3At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)O.I.H.G.S.X.
0.8291.90.98Gma.11238.1.S1_atBQ454110--3e-121At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.6786.10.97Gma.11238.1.S1_a_atBQ454110--3e-121At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.6786.10.98GmaAffx.90026.1.S1_s_atCF805751--5e-18At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.6181.80.97GmaAffx.77778.1.S1_atAW185540--5e+0At5g52480-O.I.H.G.S.X.
0.5979.50.97Gma.4927.1.S1_atBG510284--7e-3At4g15236ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.5374.20.98Gma.10455.1.S1_atBQ628953--3e-8At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.5273.10.97Gma.3107.1.S1_atBE658900--1e-97At5g62790DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE)O.I.H.G.S.X.
0.4360.60.98GmaAffx.93103.1.S1_s_atCF808828--5e-3At4g15236ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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