Co-expression analysis

Gene ID	Gma.5491.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g59570: myb family transcription factor (HF=3e+0)
Module size	12 genes
NF	0.70
%ile	95.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	80.7	0.96	Gma.5491.2.S1_at	BF425401	-	-	3e+0	At5g59570	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.81	91.7	0.97	GmaAffx.89508.1.A1_s_at	CK606172	-	-	4e-1	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.97	GmaAffx.92722.1.S1_at	CF807561	2-hydroxyisoflavanone dehydratase	-	6e-1	At2g30050	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.75	89.5	0.97	Gma.4300.3.S1_s_at	AI443042	chalcone synthase	-	1e-5	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select
0.74	89.2	0.97	Gma.4300.3.S1_x_at	AI443042	chalcone synthase	-	1e-5	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select
0.70	87.1	0.96	GmaAffx.18616.1.S1_at	BE021154	-	-	7e-3	At4g34540	isoflavone reductase family protein	O.I.	H.G.	S.X.	Please select
0.69	86.8	0.96	Gma.8449.1.S1_s_at	AF002258.1	4-coumarate:Coenzyme A ligase isoenzyme 4 /// 4-coumarate:CoA ligase isoenzyme 3	-	2e-14	At1g65060	4CL3	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.96	GmaAffx.90356.1.S1_s_at	CF806081	-	-	1e-3	At4g13660	PRR2 (PINORESINOL REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.64	83.4	0.97	Gma.5491.1.S1_at	AW309940	-	-	1e+1	At5g51105	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.97	GmaAffx.37677.1.S1_s_at	BE022626	HIDH mRNA for 2-hydroxyisoflavanone dehydratase	-	3e-1	At2g30050	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.97	Gma.2308.1.S1_s_at	AF022462.1	isoflavone synthase 2	-	6e-2	At1g67195	MIR414 (MICRORNA 414)	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.96	Gma.4300.1.S1_s_at	S46989.1	chalcone synthase	-	5e-29	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	95.6	GSM293553	67_3017.2A.R9A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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