Co-expression analysis

Gene ID	Gma.5368.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g05780: RPN8A (RP NON-ATPASE SUBUNIT 8A) (HF=2e-30)
Module size	6 genes
NF	0.49
%ile	80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	80.7	0.99	Gma.5368.1.S1_at	BQ627877	-	-	2e-30	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.99	Gma.6353.1.S1_at	AI960028	-	-	1e-4	At1g67250	proteasome maturation factor UMP1 family protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.99	Gma.2954.1.S1_at	CD404770	-	-	4e-34	At5g55160	SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.99	Gma.10826.5.S1_x_at	BM732455	-	-	2e-108	At5g55190	RAN3 (RAN GTPASE 3)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.99	Gma.11256.1.S1_at	CD401123	-	-	7e-28	At1g56450	PBG1	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.99	Gma.17905.2.S1_at	CD393233	-	-	8e-37	At4g01320	ATSTE24	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	95.6	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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