Co-expression analysis

Gene ID	Gma.5259.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g25070: unknown protein (HF=6e-9)
Module size	6 genes
NF	0.30
%ile	55.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.98	Gma.5259.1.S1_at	BI967317	-	-	6e-9	At4g25070	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	Gma.15460.1.S1_at	CD403496	-	-	7e-9	At5g64220	calmodulin-binding protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.12831.1.S1_at	BE821709	-	-	1e-4	At1g27190	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.23444.1.S1_at	BE822442	transcription factor bZIP54	-	1e+0	At3g61200	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	Gma.3692.1.S1_at	BE659812	-	-	2e+0	At1g32990	PRPL11 (PLASTID RIBOSOMAL PROTEIN L11)	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	Gma.1659.1.S1_at	AW132168	-	-	2e-10	At3g07100	protein transport protein Sec24, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage