Co-expression analysis

Gene ID Gma.5259.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g25070: unknown protein (HF=6e-9)
Module size 6 genes
NF 0.30
%ile 55.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.98Gma.5259.1.S1_atBI967317--6e-9At4g25070unknown proteinO.I.H.G.S.X.
0.3853.30.98Gma.15460.1.S1_atCD403496--7e-9At5g64220calmodulin-binding proteinO.I.H.G.S.X.
0.3853.30.98GmaAffx.12831.1.S1_atBE821709--1e-4At1g27190leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3040.40.98GmaAffx.23444.1.S1_atBE822442transcription factor bZIP54-1e+0At3g61200thioesterase family proteinO.I.H.G.S.X.
0.2735.70.98Gma.3692.1.S1_atBE659812--2e+0At1g32990PRPL11 (PLASTID RIBOSOMAL PROTEIN L11)O.I.H.G.S.X.
0.1417.50.98Gma.1659.1.S1_atAW132168--2e-10At3g07100protein transport protein Sec24, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage