Co-expression analysis

Gene ID Gma.5152.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g16620: protein kinase-related (HF=1e+0)
Module size 12 genes
NF 0.41
%ile 70.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.10.98Gma.5152.1.A1_atBI971129--1e+0At2g16620protein kinase-relatedO.I.H.G.S.X.
0.6786.10.98Gma.4484.1.S1_atBG882642--5e-37At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeO.I.H.G.S.X.
0.6080.70.98GmaAffx.8005.2.S1_atAW397421--4e-67At2g03120ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)O.I.H.G.S.X.
0.5878.80.98Gma.6428.1.S1_atAW309768--4e-26At1g05350thiF family proteinO.I.H.G.S.X.
0.5374.20.99Gma.448.2.S1_a_atBM091754--3e-21At3g60820PBF1O.I.H.G.S.X.
0.5071.70.98Gma.745.1.S1_a_atBE821420--3e-11At5g67590FRO1 (FROSTBITE1)O.I.H.G.S.X.
0.4665.50.98Gma.2905.1.S1_atAI442972--4e-172At4g29040RPT2a (regulatory particle AAA-ATPase 2a)O.I.H.G.S.X.
0.3548.60.98GmaAffx.7362.1.S1_atBM887251--1e-10At5g10880tRNA synthetase-related / tRNA ligase-relatedO.I.H.G.S.X.
0.3447.20.98Gma.10826.2.S1_atBI970873--8e-9At5g1613040S ribosomal protein S7 (RPS7C)O.I.H.G.S.X.
0.2839.00.98Gma.3948.1.S1_atAW317184--2e-28At2g46290eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putativeO.I.H.G.S.X.
0.2430.90.98Gma.4035.1.S1_atBQ453456--1e-38At5g11560catalyticO.I.H.G.S.X.
0.2228.10.98GmaAffx.92081.1.S1_atCF807806--1e-3At1g47420-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.296.0GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
3.195.8GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.195.8GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.095.6GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.095.6GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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