Co-expression analysis

Gene ID Gma.5038.3.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At5g63380: 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein (HF=2e-9)
Module size 6 genes
NF 0.09
%ile 27.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.96Gma.5038.3.S1_s_atAW830151--2e-9At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinO.I.H.G.S.X.
0.1923.70.98GmaAffx.24396.1.A1_atBU547464--1e-16At3g55260HEXO1 (BETA-HEXOSAMINIDASE 1)O.I.H.G.S.X.
0.1013.00.98GmaAffx.59019.1.S1_atAW133348--1e-136Atmg00160-O.I.H.G.S.X. peroxidase 1, cytosolic /// L-ascorbate peroxidase 2-6e-22At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X. (Conserved peptide upstream open reading frame 24)O.I.H.G.S.X. (serine carboxypeptidase-like 49)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.97935.1.S1_at, orthologous to the query gene, Gma.5038.3.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7188.0TaAffx.97935.1.S1_atAt5g63380--4e-4At1g20510OPCL1 (OPC-8:0 COA LIGASE1)O.I.H.G.S.X.
0.2532.1TaAffx.58767.1.S1_s_atAt5g63380--7e-5At2g43240nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporterO.I.H.G.S.X.
0.078.6TaAffx.73632.1.A1_atAt5g63380--1e+0At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.H.G.S.X.
0.045.8Ta.27044.1.S1_atAt5g63380--2e-1At1g67070DIN9 (DARK INDUCIBLE 9)O.I.H.G.S.X.
0.034.7TaAffx.38015.1.A1_atAt5g63380--2e+1At5g49015Expressed proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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