Co-expression analysis

Gene ID Gma.4928.1.S1_a_at
Gene name 4-coumarate:CoA ligase isoenzyme 2
Homology with ArabidopsisSimilar to At1g51680: 4CL1 (4-COUMARATE:COA LIGASE 1) (HF=4e-9)
Module size 6 genes
NF 0.65
%ile 92.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.96Gma.4928.1.S1_a_atAF002259.14-coumarate:CoA ligase isoenzyme 2-4e-9At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.H.G.S.X.
0.6786.10.96Gma.5578.3.S1_atAW310572Cytochrome P450 monooxygenase CYP98A2p (CYP98A2)-2e-1At5g22530unknown proteinO.I.H.G.S.X.
0.5778.80.96Gma.1137.1.S1_x_atBF067710--3e-9At5g48930HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE)O.I.H.G.S.X.
0.5576.30.97Gma.5578.1.S1_x_atBE659192cytochrome P450 98A2-7e-20At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)O.I.H.G.S.X.
0.5374.20.96Gma.11334.1.S1_a_atBI967327--2e-32At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.3650.80.96GmaAffx.91641.1.S1_s_atCF8073664-coumarate:CoA ligase isoenzyme 2-1e-7At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM2449164_SLO.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.296.0GSM29315162_C049.1O.SLO3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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