Co-expression analysis

Gene ID Gma.470.1.S1_at
Gene name ferrous ion membrane transport protein DMT1
Homology with ArabidopsisSimilar to At2g23150: NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3) (HF=2e-17)
Module size 18 genes
NF 0.23
%ile 47.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9093.70.88Gma.470.1.S1_atAY169405.1ferrous ion membrane transport protein DMT1-2e-17At2g23150NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)O.I.H.G.S.X.
0.4057.10.95Gma.13300.1.S1_atCD397862--1e-5At5g65840-O.I.H.G.S.X.
0.3548.60.94Gma.1781.2.S1_atBE802569--3e-44At5g14260SET domain-containing proteinO.I.H.G.S.X.
0.3142.20.94GmaAffx.69339.3.S1_atBQ272709--1e-3At2g36990SIGF (RNA POLYMERASE SIGMA-SUBUNIT F)O.I.H.G.S.X.
0.2939.00.95GmaAffx.41866.1.S1_atBI425833--6e-19At3g61080fructosamine kinase family proteinO.I.H.G.S.X.
0.2839.00.95Gma.5061.1.S1_atBQ298578--4e-51At2g01110APG2 (ALBINO AND PALE GREEN 2)O.I.H.G.S.X.
0.2532.60.95GmaAffx.87761.1.S1_atBQ628923--7e-26At2g30390FC2 (FERROCHELATASE 2)O.I.H.G.S.X.
0.2228.10.95Gma.3352.1.S1_atCA819497--3e-6At1g11790ADT1 (arogenate dehydratase 1)O.I.H.G.S.X.
0.2025.10.95Gma.17715.1.S1_atBI970432--5e-95At3g63520CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1)O.I.H.G.S.X.
0.2025.10.94GmaAffx.85918.2.S1_atBQ453444--6e-14At1g10830sodium symporter-relatedO.I.H.G.S.X.
0.2025.10.95Gma.7253.1.S1_s_atCD403828--2e-15At5g57930APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2)O.I.H.G.S.X.
0.1923.70.94Gma.10125.2.S1_atBI424236--2e-1At3g02460plant adhesion molecule, putativeO.I.H.G.S.X.
0.1923.70.93Gma.16336.1.S1_atBE659555--1e-22At1g53670MSRB1 (methionine sulfoxide reductase B 1)O.I.H.G.S.X.
0.1822.30.94GmaAffx.17650.1.S1_atBM084941homogentisate phytyltransferase VTE2-2-3e-44At3g11945homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferaseO.I.H.G.S.X.
0.1721.20.94Gma.15701.1.A1_atCD399999--8e-8At5g38290peptidyl-tRNA hydrolase family proteinO.I.H.G.S.X.
0.1215.10.94Gma.2521.3.S1_x_atBQ272849--4e-3At2g16800high-affinity nickel-transport family proteinO.I.H.G.S.X.
0.1013.00.94Gma.13391.1.A1_atCD411330--2e-6At2g38270CXIP2 (CAX-INTERACTING PROTEIN 2)O.I.H.G.S.X.
0.0912.00.91Gma.1720.1.S1_a_atCD413817--1e+0At1g14180protein binding / zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.699.2GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.699.2GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.699.2GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.499.2GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.299.2GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.299.2GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.899.1GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
7.598.9GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
7.598.9GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
7.298.9GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
7.298.9GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
7.198.8GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.298.6GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
5.998.5GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
5.998.5GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.998.5GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.598.3GSM209573mock_0hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.598.3GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
5.398.2GSM170924V2 Control, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
5.198.1GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.098.0GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.998.0GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.897.9GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.797.8GSM170925V2 Control, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
4.797.8GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM238054Soybean-PS46R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM238039Soybean-Bayfield-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.597.7GSM238053Soybean-PS46R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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