Co-expression analysis

Gene ID	Gma.4604.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g14710: acireductone dioxygenase [iron(II)-requiring]/ metal ion binding (HF=3e-47)
Module size	16 genes
NF	0.37
%ile	65.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.96	Gma.4604.1.S1_at	CA802306	-	-	3e-47	At4g14710	acireductone dioxygenase [iron(II)-requiring]/ metal ion binding	O.I.	H.G.	S.X.	Please select
0.62	82.1	0.97	Gma.7139.1.S1_at	BI971209	-	-	3e-2	At3g47300	SELT (SELT-LIKE PROTEIN PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.98	Gma.14945.1.S1_at	BG157566	-	-	2e-1	At3g12210	sequence-specific DNA binding	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	GmaAffx.46271.1.S1_at	AW348765	-	-	1e+0	At4g16800	enoyl-CoA hydratase, putative	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	Gma.5594.1.S1_at	BQ786297	-	-	1e-9	At3g09840	CDC48 (CELL DIVISION CYCLE 48)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.97	GmaAffx.39725.1.S1_at	BI945410	-	-	8e-1	At3g57280	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.97	Gma.11144.2.S1_x_at	CD401702	-	-	7e-61	At1g75630	AVA-P4	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.7635.1.S1_at	AW310136	-	-	9e-7	At2g41790	peptidase M16 family protein / insulinase family protein	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.97	Gma.11052.1.S1_at	AI795084	-	-	7e-31	At3g23490	CYN (CYANASE)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	Gma.11144.1.S1_a_at	BE820412	-	-	3e-107	At4g34720	AVA-P1	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.34569.1.S1_s_at	AW306183	-	-	1e+1	Atcg00130	-	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	Gma.11144.1.S1_x_at	BE820412	-	-	3e-107	At4g34720	AVA-P1	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	Gma.4379.3.A1_x_at	CD392760	-	-	8e-14	At4g11150	TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.97	Gma.10635.1.S1_at	CD404469	-	-	2e+0	At1g72020	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	Gma.4307.1.S1_at	BM269813	-	-	2e-3	At5g42850	-	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.8074.1.S1_s_at	BE823449	-	-	6e-10	At2g44520	COX10 (cytochrome c oxidase 10)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage