Co-expression analysis

Gene ID Gma.4379.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At4g11150: TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1) (HF=1e-23)
Module size 6 genes
NF 0.28
%ile 53.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.98Gma.4379.1.S1_x_atCD393195--1e-23At4g11150TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)O.I.H.G.S.X.
0.5071.70.98Gma.16533.1.S1_atBM308636--1e-6At4g18400unknown proteinO.I.H.G.S.X.
0.4360.60.98Gma.4379.1.S1_a_atCD393195--1e-23At4g11150TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)O.I.H.G.S.X.
0.2126.60.98Gma.4861.1.S1_atCD394162--5e-91At3g18140transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.1417.50.98Gma.1434.1.S1_atAW349400--0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.1417.50.98Gma.4037.1.S1_atAW309605--2e-177At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.095.6GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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