Co-expression analysis

Gene ID	Gma.4269.3.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At1g27450: APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) (HF=3e-19)
Module size	6 genes
NF	0.56
%ile	87.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.97	Gma.4269.3.S1_a_at	CA784404	-	-	3e-19	At1g27450	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.98	GmaAffx.92300.1.S1_s_at	CF807658	Chorismate synthase	-	5e-50	At1g48850	EMB1144 (embryo defective 1144)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.98	Gma.4269.2.S1_a_at	BU083811	-	-	8e-17	At1g27450	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.97	GmaAffx.91300.1.S1_s_at	CF805768	-	-	9e-67	At5g17770	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	Gma.4310.1.S1_at	BE822674	chorismate synthase	-	3e-58	At1g48850	EMB1144 (embryo defective 1144)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	GmaAffx.88920.1.S1_s_at	CK605763	-	-	3e-60	At1g65930	isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.7071.1.S1_at, orthologous to the query gene, Gma.4269.3.S1_a_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	Zm.7071.1.S1_at	At1g27450	adenine phosphoribosyltransferase 1	-	6e-10	At1g27450	APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.67	85.8	Zm.14815.1.S1_at	At1g27450	hypothetical protein LOC100272613	-	1e+0	At3g29680	transferase family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	Zm.6763.3.A1_at	At1g27450	hypothetical protein LOC100272739	-	1e+0	At3g59845	NADP-dependent oxidoreductase, putative	O.I.	H.G.	S.X.	Please select
0.67	85.8	Zm.16174.1.A1_at	At1g27450	IDP155 protein	-	9e-2	At1g43970	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	Zm.15210.1.A1_at	At1g27450	ARR1 protein-like	-	1e-3	At5g59570	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.35	38.9	Zm.5679.1.S1_at	At1g27450	hypothetical protein LOC100216885	-	3e-3	At2g43950	OEP37	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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