Co-expression analysis

Gene ID	Gma.405.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g12940: leucine-rich repeat family protein (HF=3e-3)
Module size	12 genes
NF	0.89
%ile	99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	91.5	0.92	Gma.405.1.A1_at	AI443411	-	-	3e-3	At5g12940	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.96	99.6	0.91	GmaAffx.72586.1.S1_at	CA852308	-	-	1e+0	At4g01450	nodulin MtN21 family protein	O.I.	H.G.	S.X.	Please select
0.96	99.6	0.91	Gma.4914.1.S1_at	BI969778	-	-	9e-1	At4g11940	unknown protein	O.I.	H.G.	S.X.	Please select
0.96	99.6	0.92	GmaAffx.79361.1.S1_at	CA785641	-	-	3e-1	At5g39910	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	H.G.	S.X.	Please select
0.96	99.6	0.92	Gma.4914.2.S1_at	BI973233	-	-	4e+0	At5g29054	unknown protein	O.I.	H.G.	S.X.	Please select
0.96	99.6	0.93	Gma.6158.1.S1_at	BI699029	-	-	7e-13	At2g43480	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.88	93.4	0.91	Gma.16915.1.A1_at	AW309561	-	-	9e-1	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.85	92.8	0.90	Gma.8279.1.A1_at	BU549975	-	-	8e-2	At1g68810	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.92	GmaAffx.6711.1.S1_at	AW350271	-	-	2e-30	At5g57090	EIR1 (ETHYLENE INSENSITIVE ROOT 1)	O.I.	H.G.	S.X.	Please select
0.79	90.8	0.91	Gma.4923.1.S1_at	BI969859	-	-	2e-2	At1g74500	bHLH family protein	O.I.	H.G.	S.X.	Please select
0.76	89.7	0.91	GmaAffx.72241.1.S1_at	BF069047	-	-	8e-1	At1g49300	RABG3E (RAB GTPASE HOMOLOG G3E)	O.I.	H.G.	S.X.	Please select
0.69	86.8	0.90	Gma.7629.1.A1_at	BI970553	-	-	3e-2	At4g37160	sks15 (SKU5 Similar 15)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	98.8	GSM294048	97_2249.2F.R268L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.3	98.6	GSM293684	22_2141.2C.R116U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.2	98.6	GSM293747	7_2141.2C.R116L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.7	98.4	GSM293566	79_2005.2A.R146L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM293601	31_2069.2B.R213L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294288	40_2425.2I.R130L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM294294	46_2421.2I.R225L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293259	45_1179.1P.R110U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM294283	36_2399.2I.R178L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM294306	57_2399.2I.R178U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293993	47_2249.2F.R268U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292580	10_1331.1I.R208L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293688	26_2137.2C.R049U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294496	60_2509.2K.R241L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294298	4_2421.2I.R225U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293656	81_2069.2B.R213U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293743	76_2131.2C.R080L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293299	81_1225.1P.R138L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293536	51_2047.2A.R306L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293736	6_2111.2C.R175U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294319	69_2411.2I.R226L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293787	31_2187.2D.R169U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293671	10_2135.2C.R065L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293764	10_2163.2D.R027L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292746	10_1426.1K.R262P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293575	87_2007.2A.R283L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293400	83_1593.1Q.R302L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293675	14_2125.2C.R103L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294255	15_2397.2I.R054L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293732	66_2131.2C.R080U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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