Co-expression analysis

Gene ID	Gma.4037.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g09840: ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41) (HF=2e-177)
Module size	23 genes
NF	0.38
%ile	67.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	87.1	0.98	Gma.4037.1.S1_at	AW309605	-	-	2e-177	At1g09840	ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	Gma.6608.1.S1_at	BQ610919	-	-	1e-27	At4g33410	signal peptide peptidase family protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.98	Gma.1065.1.S1_at	AI416915	-	-	2e-38	At4g14340	CKI1 (CASEIN KINASE I)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	Gma.5989.1.S1_at	CD399531	-	-	3e-25	At4g35450	AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	Gma.16985.1.S1_at	CD395499	-	-	1e-9	At2g47700	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.99	Gma.3291.2.S1_at	BM520616	-	-	6e-72	At4g18710	BIN2 (BRASSINOSTEROID-INSENSITIVE 2)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	GmaAffx.49094.1.S1_at	BG155160	-	-	2e-2	At4g12610	transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	Gma.10751.3.S1_x_at	AI856290	-	-	8e-24	At2g42680	MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	Gma.11129.1.S1_x_at	BE657610	-	-	6e-119	At3g05840	ATSK12	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	Gma.3441.1.S1_at	CD395226	-	-	4e-1	At1g14205	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.99	Gma.11129.2.S1_x_at	AW310162	-	-	8e-39	At3g05840	ATSK12	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.99	Gma.2136.3.S1_at	BE057237	-	-	4e-156	At3g05530	RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.1782.2.S1_a_at	BU579169	-	-	5e-7	At5g15400	U-box domain-containing protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.13295.1.S1_at	CD412186	-	-	9e-46	At5g53180	PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.954.1.S1_at	BI423790	-	-	7e-3	At2g45640	SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	Gma.17700.2.S1_at	AW100928	-	-	2e-19	At2g20760	protein binding / structural molecule	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.86299.1.S1_at	BU544507	-	-	1e-11	At1g05640	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.92496.1.S1_s_at	CF808221	-	-	1e-75	At1g78870	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.99	Gma.3626.2.S1_x_at	BQ612673	-	-	2e-60	At3g59920	ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.91177.1.S1_s_at	CF806902	-	-	2e-8	At4g28440	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.99	Gma.7574.1.A1_at	AW351139	-	-	3e-8	At1g14570	UBX domain-containing protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.52028.1.S1_at	BE023291	-	-	1e-50	At5g20570	RBX1 (RING-BOX 1)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.99	Gma.11094.2.S1_a_at	BU546011	-	-	1e-10	At2g14835	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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