Co-expression analysis

Gene ID Gma.4035.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g11560: catalytic (HF=1e-38)
Module size 6 genes
NF 0.52
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.20.99Gma.4035.1.S1_atBQ453456--1e-38At5g11560catalyticO.I.H.G.S.X.
0.6786.10.99GmaAffx.92974.1.S1_s_atCF808699--8e-2At3g17780unknown proteinO.I.H.G.S.X.
0.6786.10.99Gma.8460.1.S1_atAF404404.1acyl-CoA oxidase-7e-39At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.
0.4463.30.99Gma.448.2.S1_a_atBM091754--3e-21At3g60820PBF1O.I.H.G.S.X.
0.4057.10.99Gma.5368.1.S1_atBQ627877--2e-30At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.
0.3853.30.99Gma.17344.1.S1_atCD409198--7e-41At2g33040ATP synthase gamma chain, mitochondrial (ATPC)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.396.2GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, Ptp.8067.1.S1_at, orthologous to the query gene, Gma.4035.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5078.6Ptp.8067.1.S1_atAt5g11560hypothetical protein-9e-18At5g11560catalyticO.I.H.G.S.X.
0.5784.2Ptp.5510.1.S1_atAt5g11560hypothetical protein-5e-41At4g12650-O.I.H.G.S.X.
0.3153.7Ptp.7136.1.A1_s_atAt5g11560hypothetical protein-4e-8At3g16760tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.2543.6PtpAffx.5430.1.S1_atAt5g11560hypothetical protein-1e-103At1g19910AVA-P2O.I.H.G.S.X.
0.2441.8PtpAffx.200667.1.S1_x_atAt5g11560hypothetical protein-4e-78At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.H.G.S.X.
0.2034.6PtpAffx.21639.1.S1_atAt5g11560hypothetical protein-4e+0At4g22490protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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