Co-expression analysis

Gene ID	Gma.3807.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g36060: AP2 domain-containing transcription factor, putative (HF=8e-13)
Module size	7 genes
NF	0.04
%ile	15.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	80.7	0.95	Gma.3807.1.S1_at	BE822205	-	-	8e-13	At1g36060	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.94	Gma.1187.1.S1_at	AW350683	-	-	9e-9	At1g36060	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.94	Gma.4463.1.S1_at	CD390833	-	-	3e-24	At1g53170	ERF8	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.96	Gma.6426.1.S1_at	CA800565	-	-	7e-19	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.94	GmaAffx.43781.1.A1_at	AW350514	-	-	1e-11	At5g01710	-	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.93	GmaAffx.83794.1.S1_at	BU927215	-	-	9e-1	At4g02541	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.93	Gma.13227.1.A1_at	BE610302	-	-	1e+0	At4g18620	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	98.2	GSM209596	resistant_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.6	97.7	GSM292228	23_1052.1B.R029P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292210	72-C002.1A.V7A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM209597	susceptible_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.8	97.0	GSM292227	22_1043.1B.R024U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292230	28_1045.1B.R025L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292268	13_1181.1E.R111U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292296	42_C076.1E.R9E1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292458	58_1257.1G.R164U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292479	77_1248.1G.R154P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292313	60_1170.1E.R105P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292208	70_C004.1A.R9A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292303	4_1190.1E.R115P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292481	79_1257.1G.R164L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292271	16_1192.1E.R116P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293229	18_C068.1P.R9P3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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