Co-expression analysis

Gene ID Gma.3805.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g08220: unknown protein (HF=2e-1)
Module size 14 genes
NF 0.30
%ile 56.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9093.70.96Gma.3805.2.S1_atBI470538--2e-1At5g08220unknown proteinO.I.H.G.S.X.
0.4665.50.97Gma.1814.1.S1_atL14929.1--4e-57At3g11730ATFP8O.I.H.G.S.X.
0.3954.50.97GmaAffx.52630.1.S1_s_atAW099558--8e-4At3g28250glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.3954.50.97GmaAffx.51829.1.S1_atBU763894--5e-1At4g14810unknown proteinO.I.H.G.S.X.
0.3650.80.96Gma.16689.1.S1_atBU761189--4e-3At1g11780oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.3243.70.98Gma.8173.1.A1_atBF598954--3e-18At1g69670CUL3B (CULLIN 3B)O.I.H.G.S.X.
0.3243.70.97Gma.8237.1.A1_atAW309794--9e-1At1g63030ddf2 (DWARF AND DELAYED FLOWERING 2)O.I.H.G.S.X.
0.2839.00.97GmaAffx.2349.1.S1_atCD406663--5e-2At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.2735.70.97Gma.10751.2.S1_atAW153136--4e-13At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.2228.10.97Gma.6945.1.A1_atBI469250--7e-11At4g26550-O.I.H.G.S.X.
0.2126.60.97Gma.15004.1.S1_atCD398987--2e-9At4g21110G10 family proteinO.I.H.G.S.X.
0.2025.10.97Gma.14379.1.A1_atCD412090--7e-1At3g11770nucleic acid bindingO.I.H.G.S.X.
0.1822.30.98Gma.5847.2.A1_atAW349427--3e+0At3g06460GNS1/SUR4 membrane family proteinO.I.H.G.S.X.
0.1619.70.96Gma.5965.1.S1_atBQ610665--9e+0At5g04047-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.298.6GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.098.5GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.998.5GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.298.1GSM201107Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.298.1GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.298.1GSM201102Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.198.1GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.198.1GSM147933Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.098.0GSM182042Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.998.0GSM201108Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.998.0GSM182031Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.897.9GSM191075Soybean_Cotyledon_EP1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.897.9GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.897.9GSM201109Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.797.8GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.797.8GSM201103Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.797.8GSM191076Soybean_Cotyledon_EP2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.797.8GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.697.7GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.697.7GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.697.7GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.697.7GSM201115Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.497.6GSM147948Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.497.6GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.497.6GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.497.6GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.497.6GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.497.6GSM201112Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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