Co-expression analysis

Gene ID Gma.3730.2.S1_a_at
Gene name transcription factor
Homology with ArabidopsisSimilar to At1g80840: WRKY40 (HF=9e-15)
Module size 6 genes
NF 0.52
%ile 82.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97Gma.3730.2.S1_a_atBI320846transcription factor-9e-15At1g80840WRKY40O.I.H.G.S.X.
0.9198.60.96GmaAffx.91768.1.S1_s_atCF807493transcription factor-1e-6At2g25000WRKY60O.I.H.G.S.X.
0.5778.80.96Gma.10818.2.S1_atAW568786WRKY78-8e-23At1g80840WRKY40O.I.H.G.S.X.
0.5678.20.95GmaAffx.17284.1.A1_s_atBE659740--2e+0At5g14330unknown proteinO.I.H.G.S.X.
0.5576.30.96GmaAffx.91768.1.S1_atCF807493transcription factor-1e-6At2g25000WRKY60O.I.H.G.S.X.
0.1619.70.96Gma.7226.2.S1_a_atBM887472mitogen-activated protein kinase 1-6e-63At3g45640ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.197.3GSM29220870_C004.1A.R9A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29245858_1257.1G.R164U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29245959_1282.1G.R179P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29246968_1280.1G.R178P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29248179_1257.1G.R164L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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