Co-expression analysis

Gene ID	Gma.3639.1.S1_at
Gene name	syringolide-induced protein B15-3-5
Homology with Arabidopsis	Similar to At2g38600: acid phosphatase class B family protein (HF=1e-4)
Module size	6 genes
NF	0.48
%ile	79.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.8	0.95	Gma.3639.1.S1_at	AB083030.1	syringolide-induced protein B15-3-5	-	1e-4	At2g38600	acid phosphatase class B family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.95	GmaAffx.36250.1.S1_s_at	BG551078	-	-	2e-1	At5g62520	SRO5 (SIMILAR TO RCD ONE 5)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.95	GmaAffx.93046.1.S1_at	CF808771	-	-	3e-1	At5g62520	SRO5 (SIMILAR TO RCD ONE 5)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.96	GmaAffx.74525.2.S1_at	BI892728	WRKY6	-	5e-1	At5g64810	WRKY51	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.96	Gma.4470.1.S1_s_at	AW156251	-	-	2e+0	At5g41401	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.94	GmaAffx.46686.1.S1_at	BQ081277	-	-	1e-5	At1g07570	APK1A	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.7012.9.A1_at, orthologous to the query gene, Gma.3639.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	Zm.7012.9.A1_at	At2g38600	-	-	3e+0	At2g27510	ATFD3 (ferredoxin 3)	O.I.	H.G.	S.X.	Please select
0.73	89.9	Zm.7012.9.S1_a_at	At2g38600	hypothetical protein LOC100275729	-	3e+0	At2g27510	ATFD3 (ferredoxin 3)	O.I.	H.G.	S.X.	Please select
0.73	89.9	Zm.16845.1.A1_at	At2g38600	-	-	2e-2	At2g42910	ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4)	O.I.	H.G.	S.X.	Please select
0.57	75.1	Zm.16846.1.A1_at	At2g38600	seed specific protein Bn15D1B	-	3e+1	At5g07110	PRA1.B6 (PRENYLATED RAB ACCEPTOR 1.B6)	O.I.	H.G.	S.X.	Please select
0.50	65.7	Zm.16848.2.A1_at	At2g38600	hypothetical protein LOC100193258	-	1e-7	At3g22230	60S ribosomal protein L27 (RPL27B)	O.I.	H.G.	S.X.	Please select
0.44	55.7	Zm.14500.1.S1_at	At2g38600	hypothetical protein LOC100273126	-	3e-16	At3g14390	diaminopimelate decarboxylase, putative / DAP carboxylase, putative	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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