Co-expression analysis

Gene ID	Gma.3639.1.S1_at
Gene name	syringolide-induced protein B15-3-5
Homology with Arabidopsis	Similar to At2g38600: acid phosphatase class B family protein (HF=1e-4)
Module size	6 genes
NF	0.48
%ile	79.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.8	0.95	Gma.3639.1.S1_at	AB083030.1	syringolide-induced protein B15-3-5	-	1e-4	At2g38600	acid phosphatase class B family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.95	GmaAffx.36250.1.S1_s_at	BG551078	-	-	2e-1	At5g62520	SRO5 (SIMILAR TO RCD ONE 5)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.95	GmaAffx.93046.1.S1_at	CF808771	-	-	3e-1	At5g62520	SRO5 (SIMILAR TO RCD ONE 5)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.96	GmaAffx.74525.2.S1_at	BI892728	WRKY6	-	5e-1	At5g64810	WRKY51	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.96	Gma.4470.1.S1_s_at	AW156251	-	-	2e+0	At5g41401	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.94	GmaAffx.46686.1.S1_at	BQ081277	-	-	1e-5	At1g07570	APK1A	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.29849.1.S1_at, orthologous to the query gene, Gma.3639.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	TaAffx.29849.1.S1_at	At2g38600	Fasciclin-like protein FLA25	-	3e+0	At1g77765	unknown protein	O.I.	H.G.	S.X.	Please select
0.88	94.4	TaAffx.143995.16.A1_at	At2g38600	-	-	4e-10	At2g45010	unknown protein	O.I.	H.G.	S.X.	Please select
0.78	91.1	TaAffx.83004.1.S1_at	At2g38600	-	-	4e+0	At4g11290	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.75	89.8	TaAffx.84452.1.S1_at	At2g38600	-	-	1e+1	At5g38090	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	Ta.21280.2.S1_x_at	At2g38600	-	-	4e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	O.I.	H.G.	S.X.	Please select
0.68	86.5	TaAffx.80712.1.S1_at	At2g38600	-	-	2e+1	At5g11360	-	O.I.	H.G.	S.X.	Please select
0.67	86.3	TaAffx.106789.1.S1_at	At2g38600	-	-	4e-9	At3g05590	RPL18 (RIBOSOMAL PROTEIN L18)	O.I.	H.G.	S.X.	Please select
0.67	86.3	Ta.4216.3.A1_at	At2g38600	-	-	1e+0	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	O.I.	H.G.	S.X.	Please select
0.62	82.3	Ta.3057.3.A1_at	At2g38600	-	-	4e+0	At5g26594	ARR24 (Arabidopsis response regulator 24)	O.I.	H.G.	S.X.	Please select
0.58	79.2	Ta.21280.2.S1_at	At2g38600	-	-	4e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	O.I.	H.G.	S.X.	Please select
0.43	62.2	TaAffx.3535.1.A1_at	At2g38600	-	-	1e+1	At5g14690	unknown protein	O.I.	H.G.	S.X.	Please select
0.41	59.6	TaAffx.27716.1.S1_at	At2g38600	-	-	1e+0	At5g13870	EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)	O.I.	H.G.	S.X.	Please select
0.41	59.6	Ta.14432.3.A1_at	At2g38600	-	-	1e+0	At1g64490	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	Ta.23952.2.S1_at	At2g38600	-	-	8e-9	At4g35920	MCA1 (mid1-complementing activity 1)	O.I.	H.G.	S.X.	Please select
0.39	56.1	Ta.14337.2.S1_at	At2g38600	-	-	5e-2	At4g15930	microtubule motor	O.I.	H.G.	S.X.	Please select
0.38	54.7	TaAffx.113487.1.S1_at	At2g38600	-	-	2e-7	At2g20140	26S protease regulatory complex subunit 4, putative	O.I.	H.G.	S.X.	Please select
0.38	54.7	TaAffx.52253.1.S1_at	At2g38600	-	-	3e+0	At1g08480	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	Ta.3065.2.A1_at	At2g38600	-	-	3e-4	At2g24765	ARF3 (ADP-RIBOSYLATION FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.31	42.7	Ta.23424.3.S1_at	At2g38600	-	-	4e-4	At2g47400	CP12-1	O.I.	H.G.	S.X.	Please select
0.29	39.2	Ta.14063.3.A1_at	At2g38600	-	-	4e+0	At5g37840	-	O.I.	H.G.	S.X.	Please select
0.29	39.2	Ta.6158.2.A1_at	At2g38600	-	-	2e+0	At1g05720	selenoprotein family protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	TaAffx.47742.3.A1_at	At2g38600	-	-	4e+0	At1g18780	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.24	30.3	Ta.21296.2.S1_at	At2g38600	-	-	2e+0	At4g09260	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	Ta.10375.3.A1_at	At2g38600	-	-	1e+0	At5g22240	OFP10	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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