Co-expression analysis

Gene ID Gma.3604.4.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At4g34050: caffeoyl-CoA 3-O-methyltransferase, putative (HF=5e-8)
Module size 16 genes
NF 0.72
%ile 95.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.40.93Gma.3604.4.S1_s_atBI317410--5e-8At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.9093.70.97Gma.4300.3.S1_x_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.9093.70.97GmaAffx.92722.1.S1_atCF8075612-hydroxyisoflavanone dehydratase-6e-1At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.8392.50.97Gma.4300.3.S1_s_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.7990.80.96GmaAffx.43343.3.S1_s_atAI4966242-hydroxyisoflavanone dehydratase-4e+0At3g27503SCRL19 (SCR-Like 19)O.I.H.G.S.X.
0.7890.60.96GmaAffx.89508.1.A1_s_atCK606172--4e-1At3g10340PAL4 (Phenylalanine ammonia-lyase 4)O.I.H.G.S.X.
0.7790.30.96GmaAffx.90356.1.S1_s_atCF806081--1e-3At4g13660PRR2 (PINORESINOL REDUCTASE 2)O.I.H.G.S.X.
0.7489.20.97GmaAffx.37677.1.S1_s_atBE022626HIDH mRNA for 2-hydroxyisoflavanone dehydratase-3e-1At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.7388.90.96Gma.8449.1.S1_s_atAF002258.14-coumarate:Coenzyme A ligase isoenzyme 4 /// 4-coumarate:CoA ligase isoenzyme 3-2e-14At1g650604CL3O.I.H.G.S.X.
0.7288.10.96Gma.15492.1.S1_s_atAF276302.1chalcone isomerase-2e+0At1g52510hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.7187.80.97Gma.2308.1.S1_s_atAF022462.1isoflavone synthase 2-6e-2At1g67195MIR414 (MICRORNA 414)O.I.H.G.S.X.
0.6786.10.96GmaAffx.18616.1.S1_atBE021154--7e-3At4g34540isoflavone reductase family proteinO.I.H.G.S.X.
0.6786.10.97Gma.4300.1.S1_s_atS46989.1chalcone synthase-5e-29At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.5979.50.96Gma.5491.1.S1_atAW309940--1e+1At5g51105unknown proteinO.I.H.G.S.X.
0.5273.10.97GmaAffx.91944.1.S1_s_atCF808330NAD(P)H dependent 6'-deoxychalcone synthase-4e-2At4g37690galactosyl transferase GMA12/MNN10 family proteinO.I.H.G.S.X.
0.4158.10.96Gma.6602.2.S1_s_atBI320883--4e-103At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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