Co-expression analysis

Gene ID Gma.3524.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g28740: CYP81D1 (HF=5e-10)
Module size 26 genes
NF 0.22
%ile 46.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.10.94Gma.3524.1.S1_atCD400711--5e-10At3g28740CYP81D1O.I.H.G.S.X.
0.4057.10.97Gma.11000.1.S1_atBI967607--1e-76At1g14000VIK (VH1-INTERACTING KINASE)O.I.H.G.S.X.
0.3650.80.97Gma.10588.2.S1_atBI701379--5e-2At5g65910BSD domain-containing proteinO.I.H.G.S.X.
0.3548.60.97Gma.2008.1.S1_atCD403528--3e-14At2g19350unknown proteinO.I.H.G.S.X.
0.3346.10.97Gma.4619.1.S1_atBE658087--9e-2At2g37100protamine P1 family proteinO.I.H.G.S.X.
0.3243.70.97Gma.2008.2.S1_atBE020513--2e-1At4g29850unknown proteinO.I.H.G.S.X.
0.2939.00.97GmaAffx.60479.1.S1_atBG726023--3e-25At2g35940BLH1 (BEL1-LIKE HOMEODOMAIN 1)O.I.H.G.S.X.
0.2939.00.95GmaAffx.78768.2.S1_atAI930773--1e+0At1g22900-O.I.H.G.S.X.
0.2633.90.95GmaAffx.81399.1.S1_atAW568772--2e+0At5g35100peptidyl-prolyl cis-trans isomeraseO.I.H.G.S.X.
0.2532.60.97Gma.2750.1.S1_atAW349237--4e-74At4g33510DHS2 (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase)O.I.H.G.S.X.
0.2329.90.97GmaAffx.85720.2.S1_s_atBQ785848--9e-4At2g33810SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)O.I.H.G.S.X.
0.2228.10.98Gma.5780.1.S1_atCD393664--2e+0At3g53075beta-galactosidase/ sugar bindingO.I.H.G.S.X.
0.2228.10.98Gma.5585.1.S1_atAW310156--3e-1At1g54200unknown proteinO.I.H.G.S.X.
0.2126.60.97Gma.6836.1.A1_atAW349121--4e-1At1g56700pyrrolidone-carboxylate peptidase family proteinO.I.H.G.S.X.
0.1923.70.98GmaAffx.59560.1.S1_atBI701634--9e-7At1g17080unknown proteinO.I.H.G.S.X.
0.1619.70.98Gma.16535.1.S1_s_atBM527031--4e-4At3g49800BSD domain-containing proteinO.I.H.G.S.X.
0.1619.70.97GmaAffx.52282.1.S1_atBU577440--4e-23At3g46980transporter-relatedO.I.H.G.S.X.
0.1619.70.97Gma.3124.3.S1_a_atBI788159--3e+0At5g61412unknown proteinO.I.H.G.S.X.
0.1518.70.97GmaAffx.8278.2.S1_atBG046151--4e-6At1g27520glycoside hydrolase family 47 proteinO.I.H.G.S.X.
0.1417.50.98Gma.5122.1.S1_atCD417588--5e-16At2g18040PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1)O.I.H.G.S.X.
0.1316.30.96Gma.13074.2.S1_a_atBI972676--2e-11At5g18650zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1215.10.98Gma.12076.1.S1_atCD410539--1e-45At4g31860protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.1114.20.97GmaAffx.84858.1.S1_atCA853434--5e-2At1g33560ADR1 (ACTIVATED DISEASE RESISTANCE 1)O.I.H.G.S.X.
0.1114.20.97Gma.7014.2.S1_a_atBI321271--5e-5At1g15740leucine-rich repeat family proteinO.I.H.G.S.X.
0.1013.00.97GmaAffx.28367.1.S1_atAW397455--7e-3At1g48840unknown proteinO.I.H.G.S.X.
0.0710.20.98Gma.17893.1.S1_atBE823222--6e-4At1g09660KH domain-containing quaking protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.097.2GSM209594resistant_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.796.8GSM209595susceptible_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.796.8GSM209578resistant_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.696.7GSM209579susceptible_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.296.0GSM209585resistant_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.195.8GSM209583resistant_6hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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