Co-expression analysis

Gene ID Gma.3149.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At1g66090: disease resistance protein (TIR-NBS class), putative (HF=8e-2)
Module size 17 genes
NF 0.43
%ile 73.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.50.93Gma.3149.1.S1_a_atBU544575--8e-2At1g66090disease resistance protein (TIR-NBS class), putativeO.I.H.G.S.X.
0.5474.80.96GmaAffx.20155.1.S1_atCA819552--2e+0At2g18740small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putativeO.I.H.G.S.X.
0.5273.10.97Gma.8399.1.S1_atBU546941--3e-1At1g29970RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)O.I.H.G.S.X.
0.5273.10.96Gma.2746.1.S1_atCD412146--4e-6At5g47530auxin-responsive protein, putativeO.I.H.G.S.X.
0.5071.70.96Gma.4609.1.S1_atBI968390--2e-7At1g73540atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21)O.I.H.G.S.X.
0.4563.90.96GmaAffx.78987.1.S1_atAW306721--1e+0At5g10830embryo-abundant protein-relatedO.I.H.G.S.X.
0.4563.90.95Gma.3828.1.S1_atBE657673--2e+0At1g30260-O.I.H.G.S.X.
0.4463.30.97GmaAffx.16384.1.S1_s_atAW307590Mitogen-activated protein kinase 1 (MAPK1)-1e+1At3g10830unknown proteinO.I.H.G.S.X.
0.4360.60.97Gma.8632.1.S1_atBG511605--5e-2At3g56580zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4259.30.97Gma.6049.1.A1_atAI440639--4e+0At3g56220transcription regulatorO.I.H.G.S.X.
0.3954.50.96GmaAffx.45180.1.S1_atBU548301--1e-6At5g59550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3954.50.97Gma.18054.1.S1_atBE023870N-rich protein-2e-26At5g42050-O.I.H.G.S.X.
0.3853.30.95GmaAffx.91389.1.S1_x_atCF807114WRKY39 protein-1e-14At5g07100WRKY26O.I.H.G.S.X.
0.3548.60.96Gma.404.1.A1_atAW348243--8e-1At1g37140MCT1 (mei2 C-Terminal RRM only like 1)O.I.H.G.S.X.
0.3243.70.96Gma.8399.1.S1_a_atBU546941--3e-1At1g29970RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)O.I.H.G.S.X.
0.3142.20.96GmaAffx.32975.1.S1_atBQ094708--1e-3At3g51080zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.3040.40.95GmaAffx.25698.1.S1_atAW397682--1e-6At1g34420leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.7GSM29242225_1253.1G.R161U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29245858_1257.1G.R164U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29248179_1257.1G.R164L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29246968_1280.1G.R178P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29224963_1047.1B.R027U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29243335_1253.1G.R161L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29242528_1271.1G.R173U_rerun, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29231866_1177.1E.R109L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29227318_1177.1E.R109U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29245959_1282.1G.R179P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29223845_1051.1B.R029L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29220870_C004.1A.R9A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29224660_1047.1B.R027L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29241216_1250.1G.R155P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29215810_C010.1A.R9A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29245555_C112.1G.R9G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29233480_1172.1E.R106P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29240913_1247.1G.R154U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29246261_1271.1G.R173L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29223437_1051.1B.R029U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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