Co-expression analysis

Gene ID Gma.2841.2.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At4g10970: unknown protein (HF=2e-5)
Module size 6 genes
NF 0.10
%ile 27.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.95Gma.2841.2.S1_s_atBM523133--2e-5At4g10970unknown proteinO.I.H.G.S.X.
0.5071.70.99GmaAffx.85246.2.S1_atBM954924--2e-9At5g14250COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)O.I.H.G.S.X.
0.4057.10.99GmaAffx.92769.1.S1_s_atCF808494--1e-75At3g19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.2025.10.99GmaAffx.91748.1.S1_s_atCF807473--1e-102At2g01970endomembrane protein 70, putativeO.I.H.G.S.X.
0.069.00.98GmaAffx.76737.1.S1_atBF324681--4e-36At3g07100protein transport protein Sec24, putativeO.I.H.G.S.X.
0.035.80.96GmaAffx.59637.1.S1_atAI900257--3e+0At5g05965unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage