Co-expression analysis

Gene ID	Gma.27.1.S1_at
Gene name	nodulin
Homology with Arabidopsis	Similar to At5g17550: PEX19-2 (HF=8e-2)
Module size	6 genes
NF	0.95
%ile	99.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.87	Gma.27.1.S1_at	X69156.1	nodulin	-	8e-2	At5g17550	PEX19-2	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.85	GmaAffx.77823.1.A1_at	BE020011	-	-	1e+1	At5g60340	maoC-like dehydratase domain-containing protein	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.88	Gma.5121.1.A1_at	AW309540	-	-	9e-1	At3g52620	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.90	GmaAffx.39680.1.S1_at	BI700248	-	-	1e+0	At3g06435	Expressed protein	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.88	GmaAffx.2446.1.S1_at	AI973819	-	-	3e-4	At3g10520	AHB2 (ARABIDOPSIS HAEMOGLOBIN 2)	O.I.	H.G.	S.X.	Please select
0.73	88.9	0.87	Gma.8426.1.S1_at	D13505.1	early nodulin	-	2e-2	At3g15990	SULTR3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
37.7	99.9	GSM292315	63_C080.1E.R9E2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.3	99.7	GSM292674	24_C163.1J.V7J1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.3	99.5	GSM292725	70_C172.1J.V7J2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.3	99.2	GSM292276	20_C079.1E.R9E2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.3	99.2	GSM292280	25_1199.1E.R123L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.7	99.0	GSM292307	54_C083.1E.V7E2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1	98.8	GSM292721	67_C163.1J.V7J1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.7	98.7	GSM292423	26_C116.1G.R9G2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9	98.5	GSM292634	61_C158.1I.SLI3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM292704	51_C171.1J.V7J2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292304	51_1178.1E.R109P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM292329	76_1191.1E.R116L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292302	49_C073.1E.V7E1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage