Co-expression analysis

Gene ID Gma.2669.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g09640: SCPL19 (HF=4e-6)
Module size 12 genes
NF 0.10
%ile 27.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9298.90.87Gma.2669.1.S1_atCA935964--4e-6At5g09640SCPL19O.I.H.G.S.X.
0.3243.70.97GmaAffx.90450.1.S1_atCF805871--3e-2At4g24380unknown proteinO.I.H.G.S.X.
0.2532.60.97Gma.6602.1.S1_x_atCD415212--7e-118At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.1619.70.97GmaAffx.86528.1.S1_atBG238344--2e-5At5g59480haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.1518.70.96GmaAffx.8750.1.A1_atBE022469--3e+0At5g22710-O.I.H.G.S.X.
0.1316.30.95GmaAffx.17756.1.S1_atBE821217--9e-6At5g18890inosine-uridine preferring nucleoside hydrolase family proteinO.I.H.G.S.X.
0.1316.30.96GmaAffx.45872.1.S1_atBM095149--2e-23At4g29220PFK1 (PHOSPHOFRUCTOKINASE 1)O.I.H.G.S.X.
0.1215.10.96GmaAffx.91300.1.S1_s_atCF805768--9e-67At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.069.00.96GmaAffx.45414.1.S1_atCD408696--1e+0At5g56150UBC30 (ubiquitin-conjugating enzyme 30)O.I.H.G.S.X.
0.069.00.97Gma.4739.1.S1_atCF922021--2e-19At4g21570unknown proteinO.I.H.G.S.X.
0.024.50.82GmaAffx.74863.1.S1_s_atBQ785704--6e-35At5g56950NAP1O.I.H.G.S.X.
0.024.50.96Gma.254.1.S1_atAF404403.1acyl-CoA oxidase-2e-45At2g35690ACX5 (ACYL-COA OXIDASE 5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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