Co-expression analysis

Gene ID Gma.2520.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g46500: phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein (HF=2e-7)
Module size 6 genes
NF 0.52
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.98Gma.2520.1.S1_atAW570245--2e-7At2g46500phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinO.I.H.G.S.X.
0.6786.10.98Gma.8705.1.S1_atBQ742642--1e-23At1g65430zinc finger protein-relatedO.I.H.G.S.X.
0.6080.70.98GmaAffx.42985.1.S1_s_atAW781209--3e-22At4g05330AGD13 (ARF-GAP domain 13)O.I.H.G.S.X.
0.3650.80.98Gma.8578.1.S1_atBQ079840--4e-26At3g60150unknown proteinO.I.H.G.S.X.
0.3548.60.98Gma.2660.1.S1_atBE657176--9e-13At1g69060heat shock protein bindingO.I.H.G.S.X.
0.3346.10.98Gma.6902.1.S1_a_atCD396278--1e-12At5g01010-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage