Co-expression analysis

Gene ID	Gma.2457.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g61795: - (HF=2e+0)
Module size	10 genes
NF	0.57
%ile	87.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	87.1	0.96	Gma.2457.1.S1_at	BI967559	-	-	2e+0	At1g61795	-	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.97	Gma.4927.1.S1_at	BG510284	-	-	7e-3	At4g15236	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.98	Gma.11238.1.S1_at	BQ454110	-	-	3e-121	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.97	GmaAffx.77778.1.S1_at	AW185540	-	-	5e+0	At5g52480	-	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.97	Gma.11238.1.S1_a_at	BQ454110	-	-	3e-121	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.93103.1.S1_s_at	CF808828	-	-	5e-3	At4g15236	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.92184.1.S1_s_at	CF807909	-	-	3e-1	At2g16900	-	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.97	GmaAffx.90026.1.S1_s_at	CF805751	-	-	5e-18	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.96	GmaAffx.33296.1.S1_at	BM522949	-	-	4e-4	At1g68710	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.96	Gma.1824.1.S1_at	BI469795	-	-	7e-16	At5g26030	FC1 (ferrochelatase 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.8	GSM294047	96_3095.2F.R9F1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293802	45_3067.2D.R9D3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293408	90_C079.1Q.R9Q2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294272	26_2427.2I.R297L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM292842	21_1443.1L.R271L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293887	38_2229.2E.R022L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM292793	53_C197.1K.R9K3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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