Co-expression analysis

Gene ID Gma.2331.2.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At1g76500: SOB3 (SUPPRESSOR OF PHYB-4#3) (HF=4e-3)
Module size 6 genes
NF 0.07
%ile 22.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.90Gma.2331.2.S1_a_atBG045781--4e-3At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.7790.30.89Gma.2331.2.S1_x_atBG045781--4e-3At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.5071.70.92Gma.2331.2.S1_atBG045781--4e-3At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.0710.20.93GmaAffx.90685.1.S1_atCF806410--1e+0At5g49700DNA-binding protein-relatedO.I.H.G.S.X.
0.058.00.93GmaAffx.90685.1.S1_x_atCF806410--1e+0At5g49700DNA-binding protein-relatedO.I.H.G.S.X.
0.013.40.93GmaAffx.90514.1.S1_s_atCF806239--3e-1At1g15020thioredoxin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.798.7GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
5.798.4GSM258501Soybean shoot apical meristem, 1 short-day treatment replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
5.798.4GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
5.498.2GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
5.498.2GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
4.697.7GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
4.197.3GSM258500Soybean shoot apical meristem, 6 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.997.1GSM29307777_1077.1N.R046L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.696.7GSM209585resistant_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.696.7GSM258505Soybean shoot apical meristem, 6 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.596.6GSM209593susceptible_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.496.4GSM2931374_C053.1O.R9O3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM2935779_3009.2A.R9A2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM209595susceptible_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.296.0GSM209586susceptible_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.195.8GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.095.6GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
3.095.6GSM209592resistant_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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