Co-expression analysis

Gene ID	Gma.2316.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g05600: oxidoreductase, 2OG-Fe(II) oxygenase family protein (HF=1e-4)
Module size	28 genes
NF	0.35
%ile	63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.90	93.7	0.86	Gma.2316.1.S1_at	CD401164	-	-	1e-4	At5g05600	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.95	GmaAffx.91141.1.S1_at	CF806866	-	-	1e-1	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.95	Gma.153.1.S1_at	Y10491.1	-	-	1e-6	At3g44250	CYP71B38	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.95	Gma.153.1.S1_x_at	Y10491.1	-	-	1e-6	At3g44250	CYP71B38	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.94	Gma.6602.3.A1_s_at	BI427499	-	-	2e-8	At5g16440	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.94	Gma.8425.1.S1_s_at	D83968.1	-	-	4e-3	At5g06900	CYP93D1	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.95	Gma.8401.1.A1_at	BU547972	-	-	3e-1	At3g26170	CYP71B19	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.93	Gma.17605.1.S1_at	BI968208	chalcone synthase 1	-	9e-16	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.94	Gma.6727.1.S1_at	Y10493.1	-	-	9e-1	At3g26270	CYP71B25	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.94	GmaAffx.91782.1.S1_s_at	CF807507	-	-	2e-4	At3g01420	DOX1	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.96	GmaAffx.92620.1.S1_s_at	CF806894	-	-	4e-6	At3g44250	CYP71B38	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.94	Gma.576.1.S1_at	BM732317	-	-	2e+0	At5g35470	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.93	GmaAffx.93429.2.S1_s_at	CF808730	-	-	4e-13	At2g26740	ATSEH (Arabidopsis thaliana soluble epoxide hydrolase)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.95	GmaAffx.93392.1.S1_s_at	CF807760	-	-	2e-5	At5g42510	disease resistance-responsive family protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.93	GmaAffx.83300.1.S1_s_at	BI316203	-	-	1e-8	At5g64460	-	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.95	GmaAffx.89508.1.A1_s_at	CK606172	-	-	4e-1	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.94	GmaAffx.1841.1.A1_at	BU548501	-	-	2e-1	At3g58780	SHP1 (SHATTERPROOF 1)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.94	Gma.7250.1.S1_s_at	BU545015	MYB transcription factor MYB73	-	2e-2	At5g53200	TRY (TRIPTYCHON)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.94	GmaAffx.57967.1.S1_at	AW102170	-	-	9e-1	At1g50470	-	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.95	GmaAffx.5264.1.S1_s_at	BM521512	Kunitz trypsin inhibitor /// Kunitz trypsin inhibitor p20-1-like protein /// trypsin inhibitor p20	-	3e+0	At2g23990	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.94	GmaAffx.54986.1.S1_at	BI787823	-	-	2e-1	At1g33800	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.91	Gma.18041.1.A1_at	AW458694	-	-	2e-6	At5g05600	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.93	Gma.17594.1.A1_at	AW310993	-	-	2e-13	At1g64660	ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.94	GmaAffx.92383.1.S1_at	CF808108	MYB transcription factor MYB73	-	5e-2	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.92	Gma.9717.1.S1_at	BG653084	-	-	5e+0	At5g25090	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.95	GmaAffx.91459.1.S1_at	CF807184	-	-	2e+0	At3g44140	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.93	GmaAffx.93074.1.S1_at	CF808799	-	-	1e-35	At3g02360	6-phosphogluconate dehydrogenase family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.91	Gma.8036.1.S1_at	BM307319	-	-	1e-44	At3g54110	PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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