Co-expression analysis

Gene ID	Gma.2198.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g14360: UTR3 (UDP-GALACTOSE TRANSPORTER 3) (HF=6e-97)
Module size	6 genes
NF	0.23
%ile	47.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	57.1	0.96	Gma.2198.1.S1_at	CA802683	-	-	6e-97	At1g14360	UTR3 (UDP-GALACTOSE TRANSPORTER 3)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.96	Gma.6427.1.S1_x_at	U20502.1	calnexin	-	8e-94	At5g07340	calnexin, putative	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.96	Gma.6427.3.S1_at	AW760945	calnexin	-	3e-6	At5g07340	calnexin, putative	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.96	Gma.5024.1.S1_at	AW310126	-	-	1e-1	At5g41490	F-box family protein	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.96	GmaAffx.65050.2.S1_at	AW830642	-	-	3e-4	At1g21900	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please select
0.11	14.2	0.96	GmaAffx.41357.2.S1_at	BE824352	-	-	1e-3	At3g57220	UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	98.4	GSM209598	resistant_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.4	98.2	GSM309557	storage protein suppression expt, RNAi biol rep1, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
5.4	98.2	GSM309530	storage protein suppression expt, RNAi biol rep2, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
5.2	98.1	GSM309529	storage protein suppression expt, RNAi biol rep1, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.8	97.9	GSM309531	storage protein suppression expt, RNAi biol rep2, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.2	97.4	GSM293375	60_1587.1Q.R230L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM244779	10_SLO.M1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.1	95.8	GSM209599	susceptible_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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