Co-expression analysis

Gene ID	Gma.2174.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g27745: - (HF=6e-9)
Module size	24 genes
NF	0.36
%ile	64.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	92.6	0.98	Gma.2174.1.S1_at	BE822605	-	-	6e-9	At4g27745	-	O.I.	H.G.	S.X.	Please select
0.64	83.4	0.98	Gma.11267.3.S1_a_at	BI786263	-	-	1e-7	At2g28370	-	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.98	Gma.4193.2.S1_s_at	AW278764	-	-	2e-48	At5g26751	ATSK11	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.98	Gma.7733.2.S1_a_at	AI930986	-	-	6e-16	At3g55070	-	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.98	GmaAffx.90152.1.S1_s_at	CF805877	guanine nucleotide regulatory protein	-	8e-144	At4g17170	RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	GmaAffx.66853.1.S1_at	BG652468	-	-	6e-65	At1g60995	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	GmaAffx.91170.1.S1_s_at	CF806895	-	-	5e-58	At3g46060	ATRAB8A	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	Gma.2809.3.S1_at	BG238208	-	-	3e-16	At4g29160	SNF7.1	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	Gma.5696.2.S1_a_at	BQ629978	-	-	4e-6	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.14185.1.S1_at	BM085480	-	-	7e-23	At1g25682	cell cycle control protein-related	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	GmaAffx.58407.2.S1_at	AW307570	-	-	1e-15	At3g50050	aspartyl protease family protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.9211.1.S1_at	BM523775	-	-	6e+0	At5g45620	26S proteasome regulatory subunit, putative (RPN9)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.3757.2.S1_a_at	AI941326	-	-	8e-35	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.8141.1.A1_at	AW310817	-	-	3e-11	At5g64500	membrane protein-related	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.82598.2.S1_at	BM143186	-	-	8e-8	At5g59830	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.89144.1.A1_s_at	CK605580	-	-	2e-21	At3g60600	VAP (VESICLE ASSOCIATED PROTEIN)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.1301.9.S1_at	BE658084	-	-	1e-8	At5g35200	epsin N-terminal homology (ENTH) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	Gma.2063.1.S1_at	AB070857.2	aspartic proteinase 2	-	2e-8	At1g11910	aspartyl protease family protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	GmaAffx.18174.1.S1_at	BU545155	-	-	4e-38	At1g11020	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	Gma.1760.3.S1_at	BM893205	-	-	5e-1	At2g36295	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	Gma.13243.1.S1_at	AW277929	-	-	8e-5	At1g16240	SYP51 (SYNTAXIN OF PLANTS 51)	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.34491.1.S1_at	BE820865	-	-	9e-13	At1g16360	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.15387.1.S1_s_at	CD399274	-	-	8e-55	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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