Co-expression analysis

Gene ID	Gma.2074.2.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g15581: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.05
%ile	18.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.96	Gma.2074.2.A1_at	AW350766	-	-	3e+0	At5g15581	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	Gma.8774.1.A1_at	BU545200	-	-	1e-3	At3g21580	cobalt ion transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.96	GmaAffx.7191.1.S1_at	BE658752	-	-	4e-10	At2g33630	3-beta hydroxysteroid dehydrogenase/isomerase family protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.96	GmaAffx.19817.1.A1_at	BU549061	-	-	8e-2	At2g41590	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.96	GmaAffx.1729.1.A1_at	BI426505	-	-	1e-3	At2g17380	AP19	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.96	Gma.11458.1.S1_at	AW568851	-	-	1e+0	At2g06025	GCN5-related N-acetyltransferase (GNAT) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	95.8	GSM201125	Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.1	95.8	GSM184829	Whole Seed at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
3.1	95.8	GSM182042	Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
3.1	95.8	GSM201124	Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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