Co-expression analysis

Gene ID Gma.1913.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g37620: ACT1 (ACTIN 1) (HF=0)
Module size 6 genes
NF 0.82
%ile 98.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97Gma.1913.1.S1_atBI970928--0At2g37620ACT1 (ACTIN 1)O.I.H.G.S.X.
0.8392.50.97Gma.1324.1.S1_atBE658235--1e-131At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.8091.50.97Gma.7774.1.S1_atCD401719--1e-26At3g105403-phosphoinositide-dependent protein kinase, putativeO.I.H.G.S.X.
0.5979.50.97Gma.10004.1.S1_atBF070937--6e-25At5g36290unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.399.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
28.499.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
25.899.8GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.1098.1.S1_at, orthologous to the query gene, Gma.1913.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6786.3Ta.1098.1.S1_atAt2g37620--1e-169At3g12110ACT11 (actin-11)O.I.H.G.S.X.
0.6081.0Ta.9569.1.S1_x_atAt2g37620--3e-18At5g63510GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1)O.I.H.G.S.X.
0.4767.9Ta.23795.1.S1_atAt2g37620--3e+0At2g20760protein binding / structural moleculeO.I.H.G.S.X.
0.4464.5Ta.9569.1.S1_a_atAt2g37620--3e-18At5g63510GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1)O.I.H.G.S.X.
0.4362.2Ta.2294.3.S1_x_atAt2g37620--1e+0At1g76940RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1314.6Ta.3089.1.S1_x_atAt2g37620--4e-1At2g29860kelch repeat-containing F-box family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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