Co-expression analysis

Gene ID	Gma.18000.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g19230: respiratory burst oxidase protein E (RbohE) / NADPH oxidase (HF=6e-12)
Module size	7 genes
NF	0.59
%ile	88.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.33	46.1	0.95	Gma.18000.1.S1_at	BG406413	-	-	6e-12	At1g19230	respiratory burst oxidase protein E (RbohE) / NADPH oxidase	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.96	Gma.1137.2.S1_x_at	CA852403	-	-	2e-16	At5g48930	HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.96	Gma.1137.1.S1_x_at	BF067710	-	-	3e-9	At5g48930	HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.97	Gma.1137.1.S1_a_at	BF067710	-	-	3e-9	At5g48930	HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE)	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.96	Gma.5578.3.S1_at	AW310572	Cytochrome P450 monooxygenase CYP98A2p (CYP98A2)	-	2e-1	At5g22530	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.96	Gma.4928.1.S1_a_at	AF002259.1	4-coumarate:CoA ligase isoenzyme 2	-	4e-9	At1g51680	4CL1 (4-COUMARATE:COA LIGASE 1)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.97	Gma.5578.1.S1_x_at	BE659192	cytochrome P450 98A2	-	7e-20	At2g40890	CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	96.6	GSM293151	62_C049.1O.SLO3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293708	44_3049.2C.SLC3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM294320	6_3151.2I.SLI2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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