Co-expression analysis

Gene ID Gma.17993.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g38660: thaumatin, putative (HF=2e+0)
Module size 9 genes
NF 0.49
%ile 80.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8091.50.85Gma.17993.1.S1_atBQ628525--2e+0At4g38660thaumatin, putativeO.I.H.G.S.X.
0.6382.90.87GmaAffx.3364.1.A1_atBE347229--8e-2At4g15100scpl30 (serine carboxypeptidase-like 30)O.I.H.G.S.X.
0.5374.20.92Gma.4438.3.S1_x_atBU764535--8e-1At5g50050invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5374.20.93Gma.4438.4.S1_x_atBE021855--2e-1At5g63085-O.I.H.G.S.X.
0.5374.20.93Gma.4438.2.S1_atBQ630502--5e+0At5g33330RNase H domain-containing proteinO.I.H.G.S.X.
0.5374.20.93GmaAffx.84058.1.A1_s_atCD396207--7e-4At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)O.I.H.G.S.X.
0.4867.70.90GmaAffx.82048.1.S1_atBI320672--1e-2At4g13195CLE44 (CLAVATA3/ESR-RELATED 44)O.I.H.G.S.X.
0.4665.50.92GmaAffx.93356.1.S1_atCF807350--2e+0At5g47870unknown proteinO.I.H.G.S.X.
0.1822.30.89GmaAffx.57065.1.S1_atAI938354--7e-1At4g01680MYB55 (myb domain protein 55)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.098.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.298.1GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.897.9GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.496.4GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.496.4GSM29470871_2577.2M.R286U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29360333_2059.2B.R199L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29469261_2589.2M.R273L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29464115_2605.2M.R287L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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