Co-expression analysis

Gene ID	Gma.17993.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g38660: thaumatin, putative (HF=2e+0)
Module size	9 genes
NF	0.49
%ile	80.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	91.5	0.85	Gma.17993.1.S1_at	BQ628525	-	-	2e+0	At4g38660	thaumatin, putative	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.87	GmaAffx.3364.1.A1_at	BE347229	-	-	8e-2	At4g15100	scpl30 (serine carboxypeptidase-like 30)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.92	Gma.4438.3.S1_x_at	BU764535	-	-	8e-1	At5g50050	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.93	Gma.4438.4.S1_x_at	BE021855	-	-	2e-1	At5g63085	-	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.93	Gma.4438.2.S1_at	BQ630502	-	-	5e+0	At5g33330	RNase H domain-containing protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.93	GmaAffx.84058.1.A1_s_at	CD396207	-	-	7e-4	At5g24530	DMR6 (DOWNY MILDEW RESISTANT 6)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.90	GmaAffx.82048.1.S1_at	BI320672	-	-	1e-2	At4g13195	CLE44 (CLAVATA3/ESR-RELATED 44)	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.92	GmaAffx.93356.1.S1_at	CF807350	-	-	2e+0	At5g47870	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.89	GmaAffx.57065.1.S1_at	AI938354	-	-	7e-1	At4g01680	MYB55 (myb domain protein 55)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	98.8	GSM209598	resistant_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.2	98.1	GSM209599	susceptible_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.8	97.9	GSM170926	Rust Innoculated, biological rep1	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.4	96.4	GSM209580	resistant_48hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.4	96.4	GSM294708	71_2577.2M.R286U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293603	33_2059.2B.R199L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294692	61_2589.2M.R273L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294641	15_2605.2M.R287L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM170927	Rust Innoculated, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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