Co-expression analysis

Gene ID Gma.17602.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g53430: leucine-rich repeat family protein / protein kinase family protein (HF=4e-42)
Module size 24 genes
NF 0.21
%ile 44.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.30.93Gma.17602.1.S1_atBM271089--4e-42At1g53430leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.3346.10.96GmaAffx.93086.1.A1_atCF809241--3e-1At2g23920unknown proteinO.I.H.G.S.X.
0.3142.20.96Gma.3675.1.S1_atBI969908--9e-72At4g01370ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)O.I.H.G.S.X.
0.2839.00.96Gma.11238.1.S1_a_atBQ454110--3e-121At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.2735.70.94Gma.8459.1.S1_atAF249317.1Pti1 kinase-like protein-3e-37At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.2633.90.96Gma.2683.1.S1_atBI423792--7e+0At3g50925-O.I.H.G.S.X.
0.2633.90.95Gma.16273.1.A1_s_atCF922301--2e-8At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.2532.60.95GmaAffx.991.1.S1_atCA819655--2e-7At5g01340mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.2532.60.95GmaAffx.44825.1.S1_atBE821683--4e-3At5g61560protein kinase family proteinO.I.H.G.S.X.
0.2430.90.96GmaAffx.63090.1.A1_atBE821486--3e+0At3g42550aspartic-type endopeptidaseO.I.H.G.S.X.
0.2228.10.95Gma.10455.1.S1_s_atBQ628953--3e-8At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.2228.10.95GmaAffx.48979.1.S1_atBE058912--9e+0At4g10720ankyrin repeat family proteinO.I.H.G.S.X.
0.2025.10.96Gma.5051.1.S1_atBI970648--4e-10At5g15640mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.2025.10.97GmaAffx.81888.1.S1_atBE210383serine/threonine kinase-related protein-5e-7At4g23270protein kinase family proteinO.I.H.G.S.X.
0.2025.10.96Gma.3331.1.S1_atCB063400--2e-3At3g55980SZF1 (SALT-INDUCIBLE ZINC FINGER 1)O.I.H.G.S.X.
0.1721.20.95Gma.3397.1.S1_atBQ627985--3e-34At3g62700ATMRP10O.I.H.G.S.X.
0.1518.70.96Gma.3777.1.S1_a_atCD399954--2e+0At4g36925unknown proteinO.I.H.G.S.X.
0.1417.50.96Gma.3777.1.S1_x_atCD399954--2e+0At4g36925unknown proteinO.I.H.G.S.X.
0.1417.50.97Gma.6558.1.S1_s_atBU084402--2e-6At1g36160ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.1417.50.97GmaAffx.39725.1.S1_atBI945410--8e-1At3g57280unknown proteinO.I.H.G.S.X.
0.1114.20.96GmaAffx.86485.1.S1_atBE024024--2e-12At1g26120esterase-relatedO.I.H.G.S.X.
0.1013.00.95Gma.1655.1.S1_atCD406162--3e-21At5g07470PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3)O.I.H.G.S.X.
0.0912.00.96Gma.4096.1.S1_atBG508949cysteine synthase-3e-15At4g14880OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)O.I.H.G.S.X.
0.0710.20.95GmaAffx.71432.1.S1_atBQ742102--6e-18At4g00240PLDBETA2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.7GSM29227419_C089.1E.R9E3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29319779_C053.1O.R9O3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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