Co-expression analysis

Gene ID Gma.17534.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g42420: transporter-related (HF=9e-1)
Module size 6 genes
NF 0.14
%ile 35.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.80Gma.17534.2.S1_atBM188843--9e-1At5g42420transporter-relatedO.I.H.G.S.X.
0.9198.60.80Gma.17534.1.S1_atBG508740--4e-1At5g22990zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.5071.70.92GmaAffx.90946.1.S1_atCF808349--1e-1At2g18950HPT1 (HOMOGENTISATE PHYTYLTRANSFERASE 1)O.I.H.G.S.X.
0.3142.20.93Gma.5621.1.S1_atBU579234--1e+0At1g49850zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1417.50.92GmaAffx.90943.1.S1_s_atCF806668--6e+0At5g14670ATARFA1B (ADP-ribosylation factor A1B)O.I.H.G.S.X.
0.024.50.88Gma.17851.1.S1_atAI966437--2e-1At2g36632unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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