Co-expression analysis

Gene ID Gma.17453.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g36070: CPK18 (HF=6e-11)
Module size 6 genes
NF 0.54
%ile 84.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.20.97Gma.17453.2.S1_atBU964441--6e-11At4g36070CPK18O.I.H.G.S.X.
0.7388.90.97GmaAffx.41843.1.S1_s_atBM187682--2e-6At3g51850CPK13O.I.H.G.S.X.
0.5576.30.98Gma.3877.1.S1_atBU548211--1e-10At5g19450CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)O.I.H.G.S.X.
0.4463.30.97GmaAffx.83013.1.S1_atBQ080142--8e-1At5g16023RTFL18 (ROTUNDIFOLIA LIKE 18)O.I.H.G.S.X.
0.4057.10.97Gma.7226.2.S1_a_atBM887472mitogen-activated protein kinase 1-6e-63At3g45640ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3)O.I.H.G.S.X.
0.3346.10.97GmaAffx.89944.1.S1_s_atCF805669--1e+0At2g48130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.797.8GSM29220870_C004.1A.R9A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29242225_1253.1G.R161U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29245858_1257.1G.R164U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29248179_1257.1G.R164L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29221072-C002.1A.V7A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM2921985_C008.1A.V7A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29241216_1250.1G.R155P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29242528_1271.1G.R173U_rerun, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29233480_1172.1E.R106P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29215810_C010.1A.R9A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29232572_1188.1E.R114P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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