Co-expression analysis

Gene ID Gma.17344.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g33040: ATP synthase gamma chain, mitochondrial (ATPC) (HF=7e-41)
Module size 7 genes
NF 0.57
%ile 87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3650.80.99Gma.17344.1.S1_atCD409198--7e-41At2g33040ATP synthase gamma chain, mitochondrial (ATPC)O.I.H.G.S.X.
0.8392.50.98Gma.732.1.A1_atAW309355--4e-7At4g07390PQ-loop repeat family protein / transmembrane family proteinO.I.H.G.S.X.
0.6786.10.98GmaAffx.92974.1.S1_s_atCF808699--8e-2At3g17780unknown proteinO.I.H.G.S.X.
0.6382.90.99Gma.4035.1.S1_atBQ453456--1e-38At5g11560catalyticO.I.H.G.S.X.
0.6181.80.98Gma.8460.1.S1_atAF404404.1acyl-CoA oxidase-7e-39At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.
0.4867.70.99Gma.448.2.S1_a_atBM091754--3e-21At3g60820PBF1O.I.H.G.S.X.
0.4463.30.98Gma.5368.1.S1_atBQ627877--2e-30At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.14480.2.S1_at, orthologous to the query gene, Gma.17344.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.2Ta.14480.2.S1_atAt2g33040--3e-28At2g33040ATP synthase gamma chain, mitochondrial (ATPC)O.I.H.G.S.X.
0.5576.8Ta.2444.1.S1_atAt2g33040F1-ATPase-7e-1At2g24520AHA5 (Arabidopsis H(+)-ATPase 5)O.I.H.G.S.X.
0.5072.4Ta.13777.1.S1_atAt2g33040--1e-38At3g52300ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)O.I.H.G.S.X.
0.5072.4Ta.28376.1.S1_atAt2g33040--1e-73At3g27240cytochrome c1, putativeO.I.H.G.S.X.
0.4058.4Ta.27578.1.S1_atAt2g33040--1e-43At3g02090mitochondrial processing peptidase beta subunit, putativeO.I.H.G.S.X.
0.3142.7Ta.23107.1.S1_a_atAt2g33040--1e-51At3g53610ATRAB8O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage