Co-expression analysis

Gene ID Gma.17071.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g43890: ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18) (HF=6e-2)
Module size 6 genes
NF 0.50
%ile 81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.98Gma.17071.1.S1_atBE822434--6e-2At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.H.G.S.X.
0.5778.80.98GmaAffx.16870.1.S1_atBI970931--6e-22At2g01650PUX2 (PLANT UBX DOMAIN-CONTAINING PROTEIN 2)O.I.H.G.S.X.
0.5071.70.98Gma.2660.1.S1_atBE657176--9e-13At1g69060heat shock protein bindingO.I.H.G.S.X.
0.4867.70.98Gma.3083.1.S1_atBE474466--3e-65At4g33430BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE)O.I.H.G.S.X.
0.4665.50.98Gma.6902.1.S1_a_atCD396278--1e-12At5g01010-O.I.H.G.S.X.
0.2228.10.98Gma.2608.1.S1_atBE058812--1e-9At4g11740SAY1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29273075_C165.1J.R9J1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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