Co-expression analysis

Gene ID Gma.17062.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g42610: LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10) (HF=4e-9)
Module size 16 genes
NF 0.04
%ile 17.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8893.40.91Gma.17062.1.S1_atAW277440--4e-9At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.
0.2430.90.96Gma.3582.1.S1_atBI426240--1e-11At3g502102-oxoacid-dependent oxidase, putativeO.I.H.G.S.X.
0.1923.70.95Gma.4209.2.S1_atBQ611849--6e-1At1g70540EDA24 (embryo sac development arrest 24)O.I.H.G.S.X.
0.1822.30.94Gma.9056.1.S1_atCA819787--1e+0At3g15860unknown proteinO.I.H.G.S.X.
0.1822.30.96Gma.16783.1.A1_atBU545488--3e-1At5g49120senescence-associated protein-relatedO.I.H.G.S.X.
0.1721.20.96GmaAffx.51578.1.S1_atCD404638--4e-14At2g25190unknown proteinO.I.H.G.S.X.
0.1417.50.92Gma.675.1.A1_atAW309286--1e+0At4g13540unknown proteinO.I.H.G.S.X.
0.1114.20.96Gma.4792.1.A1_atBE657836--5e-2At1g21780BTB/POZ domain-containing proteinO.I.H.G.S.X.
0.0811.00.96Gma.3869.1.S1_atCD414576--3e-14At5g65650unknown proteinO.I.H.G.S.X.
0.0811.00.95Gma.6979.1.S1_atAW310855--6e-26At2g46225ABIL1 (Abi-1-like 1)O.I.H.G.S.X.
0.0710.20.95Gma.592.1.S1_atBU549925--1e-1At5g19090heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.069.00.94GmaAffx.80890.1.S1_atBI317615--1e-19At1g25530lysine and histidine specific transporter, putativeO.I.H.G.S.X.
0.058.00.96Gma.5922.1.S1_atCD405972--9e+0At5g04830unknown proteinO.I.H.G.S.X.
0.047.00.97GmaAffx.7140.1.S1_atAW306892--3e+0At5g19430zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.035.80.92Gma.11494.1.A1_atCD390602--2e-2At2g23700unknown proteinO.I.H.G.S.X.
0.013.40.94Gma.7791.1.S1_atBQ628965--3e-1At5g64905PROPEP3 (Elicitor peptide 3 precursor)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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