Co-expression analysis

Gene ID	Gma.1635.1.S1_at
Gene name	SEL-1
Homology with Arabidopsis	Similar to At1g73570: suppressor of lin-12-like protein-related / sel-1 protein-related (HF=3e-14)
Module size	12 genes
NF	0.04
%ile	14.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	91.9	0.92	Gma.1635.1.S1_at	AW349618	SEL-1	-	3e-14	At1g73570	suppressor of lin-12-like protein-related / sel-1 protein-related	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.95	Gma.1144.2.S1_at	BE821744	-	-	3e-42	At3g48890	ATMP2	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.95	Gma.2031.2.S1_at	BG045600	-	-	9e-10	At1g53035	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.96	Gma.8431.1.S1_at	X96864.1	phosphoribosylamine--glycine ligase	-	4e-24	At1g09830	phosphoribosylamine--glycine ligase (PUR2)	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.95	Gma.11027.1.S1_at	BG511525	-	-	3e-114	At5g43940	HOT5 (sensitive to hot temperatures 5)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.95	GmaAffx.78063.1.S1_at	BM270742	-	-	8e-1	At5g08330	TCP family transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.94	GmaAffx.89129.1.A1_s_at	CK605595	-	-	2e-5	At3g03160	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.95	Gma.536.1.A1_at	CD393946	-	-	3e+0	At5g13180	ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.96	Gma.8737.1.S1_at	BF597026	-	-	9e-1	At4g09960	STK (SEEDSTICK)	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.94	GmaAffx.14675.1.S1_at	BM891395	-	-	1e-2	At5g39410	binding / catalytic	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.95	GmaAffx.27129.1.S1_at	BM178088	-	-	1e-13	At4g38220	aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.92	Gma.2318.1.S1_at	BE823418	-	-	3e-74	At2g44900	armadillo/beta-catenin repeat family protein / F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.8	99.4	GSM309557	storage protein suppression expt, RNAi biol rep1, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
10.6	99.3	GSM309529	storage protein suppression expt, RNAi biol rep1, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
10.5	99.3	GSM309530	storage protein suppression expt, RNAi biol rep2, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
10.3	99.3	GSM309531	storage protein suppression expt, RNAi biol rep2, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
9.4	99.2	GSM309341	Wild type 1	GSE12300	Suppression of oleosin in soybean cotyledon
9.3	99.2	GSM309528	storage protein suppression expt, control tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
9.2	99.2	GSM309527	storage protein suppression expt, control tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
9.1	99.2	GSM309342	Wild type 2	GSE12300	Suppression of oleosin in soybean cotyledon
8.6	99.1	GSM309344	transgenic RNAiOleosin, biol rep 1, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
8.6	99.1	GSM309343	transgenic RNAiOleosin, biol rep 1, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
7.0	98.8	GSM309346	transgenic RNAiOleosin, biol rep 2, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
6.8	98.7	GSM309345	transgenic RNAiOleosin, biol rep 2, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
4.5	97.7	GSM201129	Whole Seed at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
4.0	97.2	GSM201111	Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.9	97.1	GSM201110	Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.6	96.7	GSM201115	Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.3	96.2	GSM201114	Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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