Co-expression analysis

Gene ID	Gma.15940.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g25545: unknown protein (HF=2e-1)
Module size	12 genes
NF	0.52
%ile	83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.94	Gma.15940.1.A1_at	AW397591	-	-	2e-1	At3g25545	unknown protein	O.I.	H.G.	S.X.	Please select
0.75	89.5	0.96	GmaAffx.20155.1.S1_at	CA819552	-	-	2e+0	At2g18740	small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative	O.I.	H.G.	S.X.	Please select
0.70	87.1	0.95	Gma.4551.1.S1_at	AW394473	-	-	2e+0	At4g16140	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.95	GmaAffx.92932.1.S1_s_at	CF808678	-	-	3e-5	At5g67450	AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.96	Gma.15724.1.S1_at	AI856145	-	-	9e-15	At3g44260	CCR4-NOT transcription complex protein, putative	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.95	Gma.3828.1.S1_at	BE657673	-	-	2e+0	At1g30260	-	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.96	Gma.15724.2.S1_at	AW350291	-	-	6e-16	At5g22250	CCR4-NOT transcription complex protein, putative	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.97	Gma.404.1.A1_at	AW348243	-	-	8e-1	At1g37140	MCT1 (mei2 C-Terminal RRM only like 1)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.96	GmaAffx.93108.1.S1_s_at	CF808027	-	-	3e-16	At5g22250	CCR4-NOT transcription complex protein, putative	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.96	GmaAffx.45180.1.S1_at	BU548301	-	-	1e-6	At5g59550	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.95	Gma.4609.1.S1_at	BI968390	-	-	2e-7	At1g73540	atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.96	GmaAffx.81988.1.S1_at	BU545170	WRKY47 protein	-	3e-24	At4g31550	WRKY11	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.7	GSM292481	79_1257.1G.R164L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292458	58_1257.1G.R164U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM292422	25_1253.1G.R161U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM292469	68_1280.1G.R178P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM292318	66_1177.1E.R109L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292249	63_1047.1B.R027U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM292246	60_1047.1B.R027L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292238	45_1051.1B.R029L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292273	18_1177.1E.R109U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292459	59_1282.1G.R179P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292433	35_1253.1G.R161L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292425	28_1271.1G.R173U_rerun, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292455	55_C112.1G.R9G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292213	76_1023.1A.R013U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292412	16_1250.1G.R155P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292462	61_1271.1G.R173L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292208	70_C004.1A.R9A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292409	13_1247.1G.R154U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292464	63_C123.1G.V7G3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292410	14_1254.1G.R161P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292232	31_1045.1B.R025U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292241	4_1048.1B.R027P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292479	77_1248.1G.R154P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292334	80_1172.1E.R106P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292296	42_C076.1E.R9E1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292467	66_C109.1G.V7G1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292234	37_1051.1B.R029U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292485	82_1258.1G.R164P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292655	81_C155.1I.V7I2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292257	76_C032.1B.V7B3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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