Co-expression analysis

Gene ID	Gma.15806.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g32551: LUG (LEUNIG) (HF=3e-14)
Module size	6 genes
NF	0.10
%ile	27.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	82.9	0.97	Gma.15806.1.S1_at	BI967498	-	-	3e-14	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.97	Gma.6461.1.S1_at	CD412832	-	-	1e-29	At2g27170	TTN7 (TITAN7)	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.97	Gma.16352.1.S1_at	BI970434	-	-	5e+0	At4g14450	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.97	Gma.10602.1.S1_at	BG726448	-	-	9e-3	At5g56140	KH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.97	Gma.16400.1.S1_at	AI736450	-	-	1e-29	At3g07160	ATGSL10 (glucan synthase-like 10)	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.97	Gma.7859.1.S1_at	BU082495	-	-	3e+0	At3g04943	LCR41 (Low-molecular-weight cysteine-rich 41)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.6	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.4	97.6	GSM182031	Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
4.4	97.6	GSM182041	Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
4.3	97.5	GSM184829	Whole Seed at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
4.3	97.5	GSM182042	Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
4.2	97.4	GSM184828	Whole Seed at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
4.1	97.3	GSM191075	Soybean_Cotyledon_EP1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.9	97.1	GSM191076	Soybean_Cotyledon_EP2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.9	97.1	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.8	97.0	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.8	97.0	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.8	97.0	GSM258498	Soybean shoot apical meristem, 2 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.7	96.8	GSM201104	Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.7	96.8	GSM147935	Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
3.7	96.8	GSM201105	Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.7	96.8	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.6	96.7	GSM191087	Soybean_Cotyledon_II1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.6	96.7	GSM147933	Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
3.6	96.7	GSM191088	Soybean_Cotyledon_II2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.5	96.6	GSM267288	Axillary meristem from 10-day-old soybean seedlings repliacte 2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.4	96.4	GSM147950	Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
3.4	96.4	GSM182047	Whole Seed at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
3.4	96.4	GSM191083	Soybean_Cotyledon_EPD1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.4	96.4	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.4	96.4	GSM201117	Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.4	96.4	GSM201119	Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.4	96.4	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM237069	Soy_shoot apical meristem2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.3	96.2	GSM258500	Soybean shoot apical meristem, 6 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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