Co-expression analysis

Gene ID	Gma.1479.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g19120: ERD3 (early-responsive to dehydration 3) (HF=6e-21)
Module size	6 genes
NF	0.17
%ile	38.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.97	Gma.1479.2.S1_at	AW279120	-	-	6e-21	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.97	GmaAffx.65773.1.S1_at	BI320311	-	-	2e-44	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.99	GmaAffx.27367.1.S1_at	BG653618	-	-	7e-9	At1g79690	atnudt3 (Arabidopsis thaliana Nudix hydrolase homolog 3)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.99	GmaAffx.85171.1.S1_at	BU091668	-	-	7e-6	At5g10710	protein binding	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.99	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.98	GmaAffx.93620.1.S1_s_at	CF809345	-	-	3e-19	At3g61140	FUS6 (FUSCA 6)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.22629.2.S1_at, orthologous to the query gene, Gma.1479.2.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	84.9	PtpAffx.22629.2.S1_at	At4g19120	hypothetical protein	-	2e-41	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	PtpAffx.200077.1.S1_s_at	At4g19120	AP2 domain-containing transcription factor	-	8e-58	At1g16060	ovule development protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	PtpAffx.209231.1.S1_s_at	At4g19120	hypothetical protein	-	9e-71	At5g16240	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	PtpAffx.4979.1.A1_at	At4g19120	hypothetical protein	-	1e+0	At5g03760	ATCSLA09	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.15	25.3	PtpAffx.5622.2.S1_s_at	At4g19120	hypothetical protein	-	2e-9	At2g22830	SQE2 (squalene epoxidase 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	PtpAffx.45220.1.A1_at	At4g19120	hypothetical protein	-	1e+0	At3g61200	thioesterase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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